Ohio University Links
Biophysics and Bioinformatics Links
- Protein Data Bank - This database stores and dispenses information on the DNA
and amino acid sequences and X-ray and NMR structures of proteins. One can download
RASMOL (the viewer for protein structures) here.
- National Center for Biotechnology Information - This is the
National Institutes of Health's clearinghouse for all of the national and international DNA and protein sequence and
structure databases. One can get to
GENBANK (the storehouse for DNA sequences) by using clicking on the "Entrez" button and clicking
on "Entrez--nucleotide". Another useful resource for the Genome is at the Nature website on the genome (and other "omes"):
Nature Omics Database.
-
Reading Frames in DNA - This site has a nice tutorial on various aspects of DNA sequence analysis
-
Movies of Bacteria moving - This is Howard Berg's site at the Rowlands Institute at Harvard U.
It has movies of bacteria executing their persistent random walk (it requires
Quicktime and it may be a bit quirky).
- Online Atlas of Histology - This online atlas of histology
from University of Illinois at Urbana Champaign. It has lots of images of cells from many different tissues
that can be examined at different magnifications.
- PHYS 4301/5301: My Biophysics course - This is the website for my own course in
cell and molecular biophysics. The course materials are served off of LON-CAPA. Anyone
wishing to get access the materials should contact me.
-
Phil Nelson's Biological Physics course - This is a description of the introductory course for undergrad
and grad students across disciplines at University of Pennsylvania. Phil Nelson produced a wonderfully
thoughtful (and beautifully written) textbook:
Biological Physics: Energy, information, life, W.H. Freeman, 2003. There's now a 2nd edition.
- Numerical Recipes - This is a very useful resource for scientific programming.
I have a very old dog-eared Fortran version from the 1980s and a newer C++ version (signed by one of the authors
when he came for a colloquium). One can download section of older versions,
but one will eventually want to invest
in a copy. The site also has a link to downloadable sections of Abramowitz & Stegun's incomparable
Handbook of Mathematical Functions.
Scientific Journals
Science & Knowledge Links
-
Encyclopedia of Physics Demonstrations - This page is available through OhioLink. It contains instructional videos for
introductory Physics.
- Wikipedia - The Wikipedia is an encyclopedia written by users. Many of the articles
are excellent and it's a good place to start. There is also a program to put the entire
Encyclaedia Britanica 11th edition online through
Project Gutenberg.
- NASA - The source for information on NASA's missions to explore space.
The European Space Agency website also has lots of science information.
Another interesting solar system-related website is The Nine Planets.
- Official US Time - This site is maintained by NIST, the
National Institute of Standards and Techonology. It gives the official US Time from national atomic clocks.
- WebmineralThis website has lots of physical data on minerals.
- Straight Dope - Cecil Adams writes a syndicated column for weekly
newspapers all over Canada and the U.S. in which he or his staffers
answer random questions that have been puzzling people (such as e.g.
What are
the real Lyrics to the song "Louie, Louie?") Many of these questions
deal with science and the answers are very good, as a rule. It has the best explanation
of the bizarre Fahrenheit temperature scale I've seen (i.e.
why is the freezing
point of water 32 F?).
News and Entertainment
- CBC Radio - CBC Radio 1 and Radio 2 are the two things I miss most about
Canada! Fortunately, they are available over the internet.
- PBS - Insightful and intelligent television.
I've been a fan of Nova
for years; even before I moved to the U.S. PBS comes to Montreal through
stations in Plattsburg, NY and Burlington, Vermont.
- National Public Radio (NPR) -
My wife and I are members of station WOUB.
- The New York Times - We mostly read it online now
but we get Sunday Times (the NY Times Magazine has the Sunday crossword and other puzzles). We like the acrostics and
the Spelling Bee.
- Snopes Urban Legends Site - If you want to check out whether something is an urban legend
or real (or both), this is perhaps the definitive site. Very sensible!
- Athena Cinema - The Athena Cinema is on historic, downtown Court St. in Athens.
The Athena shows mostly art movies. It also hosts the Athens International Film Festival in late April-early May.
- Athena Grand Theatre - The Athena Grand shows mass market movies.
Personal links
-
Melanie Schori - My wife, Melanie Schori, is a botanist.
She has her Ph.D. from the Department of Environmental and Plant Biology at Ohio University.
- Andrew Tees - My brother is an opera singer.
He's had gigs all over Canada and also in the U.S.
A search on his name in Google will lead to his upcoming performances.
- First Presbyterian Church in Athens - This is the church I attend
(and have served as an elder and deacon). It's a More Light church.
The congregation is friendly and the music is good.
- Athens Contradancing -
The Southeast Ohio Traditional Dance Society hosts contradances in Athens, Ohio.
Contradancing is a great way to meet people -- it's how I met my wife!
- Invasive Plants - Again thanks to my wife,
I have been working at invasive plant removal. In the Spring there is a major effort to remove Garlic Mustard
(Alliaria petiolota or Alliaria officinalis) from public lands (Stroud's Run State Park, The Ridges at OU etc)
where it is trying to take over.
- Genealogy - After a question in 2009 from a long-lost Tees relative,
I got bitten by the genealogy bug. Our branch of the Montreal Tees family knew next to nothing about our Tees
ancestors. We had a family Bible that listed the descendants of David Tees
(who came to Quebec City in the early 1820s and then got to Montreal about 1830). I had always thought that our
family name had something to do with the River Tees in Yorkshire, but if that's true, then it's long, long in the past.
In fact, virtually all members of the Tees diaspora started from County Donegal in Ireland (to which they had
come in the early 1600s from either England or Scotland). In Montreal, David Tees' family prospered. His son
John was in the grocery business and his sons David and Joseph were both owners of woodworking businesses.
All of the Tees sons (except William who was a farmer in Hemmingford, QC) eventually participated in a furniture
company, eventually called Tees & Co. that made roll-top desks, office furniture and funeral equipment.
There are a number of other Tees lines in the UK and Ireland as well as the US, Canada and Australia.
We're all related, but finding out how is hard given the destruction of Irish records when the Public Records
Office in Dublin burned in 1922. If you have any information about the Tees family, please contact me.
- Musical CV - I've been singing in choirs since I was very young. This
page lists the pieces I've performed and the choirs I've been in as an adult
starting with my Gilbert & Sullivan Savoy Opera experiences as an undergrad
at McGill.
Language links
- Word Detective - As this website says, "Nonplussed by...Nonplussed?".
The Word Detective has articles talking about word derivations. Very interesting...
- Botanical French - To help my wife and her colleagues,
I have had to do quite a bit of translation of
botanical French. The Robert et Collins French-English bilingual dictionary that I own
actually has a surprisingly large amount of botanical terminology. Sometimes, however,
terms are just too specialized. I have found the Missouri Botanical Gardens site at left very helpful.