Annotation of the F-box gene superfamily in 111 plant genomes
Hua, Z. (2021). Diverse evolution in 111 plant genomes reveals purifying and dosage balancing selection models for F-box genes. Int J Mol Sci 22, 871.
Annotation of the UPS members in 14 plant genomes
Hua, Z., and Yu, P. (2019). Diversifying evolution of the ubiquitin-26s proteasome system in Brassicaceae and Poaceae. Int J Mol Sci 20, 3226.
Annotation of Skp1 genes in 3 Arabidopsis species
Hua, Z., and Gao, Z. (2019). Adaptive and degenerative evolution of the S-Phase Kinase-Associated Protein 1-Like family in Arabidopsis thaliana. PeerJ 7, e6740.
Annotation of ubiquitin and ubiquitin-like genes in 50 plant genomes
Hua, Z., Doroodian, P., and Vu, W. (2018). Contrasting duplication patterns reflect functional diversities of ubiquitin and ubiquitin-like protein modifiers in plants. Plant J 95, 296-311.
Annotation of F-box genes in 18 plant genomes
Hua, Z., Zou, C., Shiu, S.H., and Vierstra, R.D. (2011). Phylogenetic comparison of F-box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift. PLoS One 6, e16219.
Annotation of Arabidopsis thaliana