At Ohio University

Manuscripts in review or in preparation

  • Li, Y.(g), Yapa, M.M.(g), Liao, F.(v), and Hua, Z.* (in preparation)
  • Li, Y.(g), Yu, P.(g) and Hua, Z.* (in preparation)
  • Yapa, M.M.(g),Doroodian, P.(g), Gao, Z.(v), Sieg, J.(u), Gomez, M.(u), and Hua, Z.* (in preparation)
  • Yu, P.(g) and Hua, Z.* (in preparation)
    • A machine learning approach to prioritizing functionally active F-box members in Arabidopsis thaliana

    Li, Y.(g), Yapa, M.M.(g) and Hua, Z.* (2021)

    The ubiquitin switch in plant stress response

    Doroodian, P.(g) and Hua, Z.* (2021)

    Diverse evolution in 111 plant genomes reveals purifying and dosage balancing selection models for F-box genes

    Hua, Z.* (2021)

    F-box protein CFK1 interacts with and degrades de novo DNA methyltransferase in Arabidopsis

    Chen, J., Jiang, J., Liu, J., Qian, S., Song, J., Kabara, R., Delo, I., Serino, G., Liu, F., Hua, Z., Zhong, X. (2020)

    Generation of a fertile ask1 mutant uncovers a comprehensive set of SCF-mediated intracellular functions

    Yapa, M.M.(g), Yu, P.(g), Liao, F.(v), Moore, A.G.(u) and Hua, Z.* (2020)

    Diversifying evolution of the ubiquitin-26s proteasome system in Brassicaceae and Poaceae

    Hua, Z.* and Yu, P.(g) (2019)

    Closing Target Trimming and CTTdocker programs for discovering hidden superfamily loci in genomes

    Hua, Z.*, and Early, M.J.(u) (2019)

    Using CTT for comprehensive superfamily gene annotations

    Hua, Z.* (2019)

    ATG8-Binding UIM proteins define a new class of autophagy adaptors and receptors

    Marshall, R.S., Hua, Z., Mali, S., McLoughlin, F., and Vierstra, R.D. (2019)

    Adaptive and degenerative evolution of the S-Phase Kinase-Associated Protein 1-Like family in Arabidopsis thaliana

    Hua, Z.* and Gao, Z.(v) (2019)

    OsACL-A2 negatively regulates cell death and disease resistance in rice

    Ruan, B.^, Hua, Z.^, Zhao, J.^, et al (^co-first authors) (2019)

    Data Oriented Genomics Techniques

    Hua, Z.* (2019)

    Genome comparison implies the role of Wsm2 in membrane trafficking and protein degradation

    Zhang, G., and Hua, Z.* (2018)

    Contrasting duplication patterns reflect functional diversities of ubiquitin and ubiquitin-like protein modifiers in plants

    Hua, Z.*, Doroodian, P.(u), and Vu, W.(u) (2018)

    Multilevel Regulation of Abiotic Stress Responses in Plants

    Haak, D.C., Fukao, T., Grene, R., Hua, Z., Ivanov, R., Perrella, G., and Li, S. (2017)

    Ubiquitin Goes Green

    Hua, Z. and Vierstra, R.D. (2016)

    Prior to Ohio University

    Epigenomic programming contributes to the genomic drift evolution of the F-Box protein superfamily in Arabidopsis

    Hua, Z., Pool, J.E., Schmitz, R.J., Schultz, M.D., Shiu, S.H., Ecker, J.R., and Vierstra, R.D. (2013)

    The light-response BTB1 and BTB2 proteins assemble nuclear ubiquitin ligases that modify phytochrome B and D signaling in Arabidopsis

    Christians, M.J., Gingerich, D.J., Hua, Z., Lauer, T.D., and Vierstra, R.D. (2012)

    Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift

    Hua, Z., Zou, C., Shiu, S.H., and Vierstra, R.D. (2011)

    The cullin-RING ubiquitin-protein ligases

    Hua, Z. and Vierstra, R.D. (2011)

    Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis

    Miller, M.J., Barrett-Wilt, G.A., Hua, Z., and Vierstra, R.D. (2010)

    Genome sequencing and analysis of the model grass Brachypodium distachyon

    International Brachypodium Initiative (including Hua, Z. and Vierstra, R.D.) (2010)

    The amino terminal F-box domain of Petunia inflata S-locus F-box protein is involved in the S-RNase-based self-incompatibility mechanism

    Meng, X., Hua, Z., Sun, P., and Kao, T.H. (2011)

    Collaborative non-self recognition system in S-RNase-based self-incompatibility

    Kubo, K., Entani, T., Takara, A., Wang, N., Fields, A.M., Hua, Z., Toyoda, M., Kawashima, S., Ando, T., Isogai, A., Kao, T.H., and Takayama, S. (2010)

    Functional characterization of two chimeric proteins between a Petunia inflata S-locus F-box protein, PiSLF2, and a PiSLF-like protein, PiSLFLb-S2

    Fields, A.M., Wang, N., Hua, Z., Meng, X., and Kao, T.H. (2010)

    Ectopic expression of S-RNase of Petunia inflata in pollen results in its sequestration and non-cytotoxic function

    Meng, X., Hua, Z., Wang, N., Fields, A.M., Dowd, P.E., and Kao, T.H. (2009)

    Biochemical models for S-RNase-based self-incompatibility

    Hua, Z., Fields, A., and Kao, T.H. (2008)

    Identification of major lysine residues of S(3)-RNase of Petunia inflata involved in ubiquitin-26S proteasome-mediated degradation in vitro

    Hua, Z., and Kao, T.H. (2008)

    Comparison of Petunia inflata S-Locus F-box protein (Pi SLF) with Pi SLF like proteins reveals its unique function in S-RNase based self-incompatibility

    Hua, Z., Meng, X., and Kao, T.H. (2007)

    Identification and characterization of components of a putative Petunia S-locus F-box-containing E3 ligase complex involved in S-RNase-based self-incompatibility

    Hua, Z. and Kao, T.H. (2006)

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